Source code for xhydro.utils
"""Utility functions for xhydro."""
import datetime as dt
import xarray as xr
from xscen.diagnostics import health_checks
__all__ = ["health_checks", "merge_attributes", "update_history"]
[docs]
def update_history(
hist_str: str,
*inputs_list: xr.DataArray | xr.Dataset,
new_name: str | None = None,
**inputs_kws: xr.DataArray | xr.Dataset,
) -> str:
r"""
Return a history string with the timestamped message and the combination of the history of all inputs.
The new history entry is formatted as "[<timestamp>] <new_name>: <hist_str> - xhydro version: <xhydro.__version__>."
Parameters
----------
hist_str : str
The string describing what has been done on the data.
\*inputs_list : xr.DataArray or xr.Dataset
The datasets or variables that were used to produce the new object.
Inputs given that way will be prefixed by their "name" attribute if available.
new_name : str, optional
The name of the newly created variable or dataset to prefix hist_msg.
\*\*inputs_kws : xr.DataArray or xr.Dataset
Mapping from names to the datasets or variables that were used to produce the new object.
Inputs given that way will be prefixes by the passed name.
Returns
-------
str
The combine history of all inputs starting with `hist_str`.
"""
from xhydro import ( # pylint: disable=cyclic-import,import-outside-toplevel
__version__,
)
merged_history = merge_attributes(
"history",
*inputs_list,
new_line="\n",
missing_str="",
**inputs_kws,
)
if len(merged_history) > 0 and not merged_history.endswith("\n"):
merged_history += "\n"
merged_history += f"[{dt.datetime.now():%Y-%m-%d %H:%M:%S}] {new_name or ''}: {hist_str} - xhydro version: {__version__}"
return merged_history
[docs]
def merge_attributes(
attribute: str,
*inputs_list: xr.DataArray | xr.Dataset,
new_line: str = "\n",
missing_str: str | None = None,
**inputs_kws: xr.DataArray | xr.Dataset,
) -> str:
r"""
Merge attributes from several DataArrays or Datasets.
If more than one input is given, its name (if available) is prepended as: "<input name> : <input attribute>".
Parameters
----------
attribute : str
The attribute to merge.
\*inputs_list : xr.DataArray or xr.Dataset
The datasets or variables that were used to produce the new object.
Inputs given that way will be prefixed by their `name` attribute if available.
new_line : str
The character to put between each instance of the attributes. Usually, in CF-conventions,
the history attributes uses '\\n' while cell_methods uses ' '.
missing_str : str
A string that is printed if an input doesn't have the attribute. Defaults to None, in which
case the input is simply skipped.
\*\*inputs_kws : xr.DataArray or xr.Dataset
Mapping from names to the datasets or variables that were used to produce the new object.
Inputs given that way will be prefixes by the passed name.
Returns
-------
str
The new attribute made from the combination of the ones from all the inputs.
"""
inputs = [(getattr(in_ds, "name", None), in_ds) for in_ds in inputs_list]
inputs += list(inputs_kws.items())
merged_attr = ""
for in_name, in_ds in inputs:
if attribute in in_ds.attrs or missing_str is not None:
if in_name is not None and len(inputs) > 1:
merged_attr += f"{in_name}: "
merged_attr += in_ds.attrs.get(attribute, "" if in_name is None else missing_str)
merged_attr += new_line
if len(new_line) > 0:
return merged_attr[: -len(new_line)] # Remove the last added new_line
return merged_attr